Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2036PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mlo:mlr1614 hypothetical protein; Belongs to the CoA-transferase III family. (390 aa)    
Predicted Functional Partners:
Meso_2481
PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: bms:BR1085 glutaryl-CoA dehydrogenase.
 
  0.937
Meso_1053
Succinate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_2660 hypothetical protein.
    
  0.901
Meso_1323
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mlo:mll1168 succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.901
Meso_2652
PFAM: aldehyde dehydrogenase; KEGG: cgb:cg0067 succinate-semialdehyde dehydrogenase (NADP+).
    
  0.901
Meso_3766
PFAM: aldehyde dehydrogenase; KEGG: pub:SAR11_0766 succinate-semialdehyde dehydrogenase (NAD(P)).
    
  0.901
Meso_3399
2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
     
 0.900
Meso_2037
PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: mlo:mlr1615 acetolactate synthase large subunit.
 
 
 0.839
Meso_2035
PFAM: CBS domain containing protein; KEGG: ret:RHE_CH02435 putative inosine-5'-monophosphate dehydrogenase protein.
       0.533
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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