Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2062TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: mlo:mll1660 dipeptide binding protein component of ABC transporter. (550 aa)    
Predicted Functional Partners:
Meso_2060
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1657 permease protein of dipeptide ABC transporter.
 
  0.942
Meso_2061
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1659 permease protein of oligopeptide ABC transporter.
 
   0.931
Meso_2059
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: mlo:mll1656 ATP-binding protein of dipeptide ABC transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily.
 
  0.911
Meso_2851
PFAM: ABC-3; KEGG: jan:Jann_2082 ABC-3.
  
  
  0.876
Meso_1115
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.
   
 
  0.859
Meso_0038
PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA.
  
 
 0.858
Meso_1699
PFAM: extracellular solute-binding protein, family 5; KEGG: mlo:mlr0514 probable binding protein component of ABC transporter.
  
 
 0.858
Meso_1114
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02119 probable general L-amino acid transport permease ABC transporter protein.
   
 
  0.857
Meso_1540
Protein of unknown function DUF140; PFAM: Sulfate transporter/antisigma-factor antagonist STAS protein of unknown function DUF140; KEGG: mlo:mll0801 putative ABC transport system permease protein.
     
  0.857
Meso_1563
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
     
  0.857
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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