Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2079KEGG: rsp:RSP_2597 ABC transporter, periplasmic substrate-binding protein. (342 aa)    
Predicted Functional Partners:
Meso_2080
PFAM: ABC transporter related; SMART: ATPase; KEGG: rsp:RSP_2596 ABC transporter, ATPase subunit.
 
 0.840
Meso_2078
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2598 ABC transporter, inner membrane subunit.
 
  0.831
Meso_2892
Amino acid ABC transporter substrate-binding protein, PAAT family; SMART: extracellular solute-binding protein, family 3; TC 3.A.1.3.-.
  
     0.748
Meso_3541
PFAM: ABC transporter related; SMART: ATPase; KEGG: bbr:BB1072 ATP-binding component of ABC transporter.
 
 0.544
Meso_2045
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01825 putative permease ABC transporter protein.
 
  0.525
Meso_2046
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01826 putative permease ABC transporter protein.
 
  0.520
Meso_0809
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02345 putative transport system permease ABC transporter protein.
 
  0.519
Meso_2962
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1306 ABC transporter, permease component.
 
  0.517
Meso_3539
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BG10657 aliphatic sulfonates transport system permease protein.
 
  0.515
Meso_0808
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02345 putative transport system permease ABC transporter protein.
 
  0.512
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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