Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2122PFAM: CBS domain containing protein protein of unknown function DUF21 transporter-associated region; KEGG: mlo:mlr2581 hemolysin. (436 aa)    
Predicted Functional Partners:
Meso_3194
PFAM: Integral membrane protein TerC; KEGG: bms:BR1721 hypothetical protein.
      0.902
Meso_2121
PFAM: Extensin-like-like; KEGG: bmb:BruAb1_1501 hypothetical protein.
       0.622
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.461
Meso_2120
PFAM: Extensin-like-like; KEGG: mlo:mlr2573 hypothetical protein.
       0.423
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.418
Meso_2119
KEGG: bmb:BruAb2_0556 hypothetical protein.
       0.408
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.