Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Meso_2124Transcriptional regulator, HxlR family; PFAM: helix-turn-helix, HxlR type; KEGG: mlo:mlr2600 hypothetical protein. (136 aa)    
Predicted Functional Partners:
Meso_2123
PFAM: NADPH-dependent FMN reductase; KEGG: mlo:mll2599 probable reductase.
       0.602
Meso_3051
PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP2367 major facilitator family transporter.
  
     0.441
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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