Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Meso_2207PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mlo:mlr2805 hypothetical protein. (251 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.908
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
  0.900
Meso_4048
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
     
  0.900
Meso_2208
PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mlo:mlr2808 tRNA/rRNA methyltransferase.
       0.643
Meso_1440
TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor TonB-dependent receptor, plug; KEGG: mlo:mlr1155 heme acquisition protein hasR.
  
  
 0.539
Meso_2206
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pae:PA4170 hypothetical protein.
       0.501
Meso_1442
PFAM: periplasmic binding protein; KEGG: sme:SMc01512 putative hemin binding periplasmic transmembrane protein.
 
  
 0.496
Meso_2744
PFAM: glutamine amidotransferase, class-II glutamate synthase, alpha subunit-like ferredoxin-dependent glutamate synthase glutamate synthase; KEGG: mlo:mll3030 glutamate synthase (NADPH) large chain.
     
 0.414
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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