Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mnmAtRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (391 aa)    
Predicted Functional Partners:
Meso_1782
PFAM: aminotransferase, class V; KEGG: mlo:mlr0015 nitrogenase cofactor synthesis protein nifS.
 
 
 0.870
Meso_0004
PFAM: UBA/THIF-type NAD/FAD binding fold MoeZ/MoeB; KEGG: mlo:mll5577 molybdenum cofactor biosynthesis protein.
  
 
 0.699
Meso_2563
TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS; KEGG: mlo:msl5792 thiamin biosynthesis ThiS.
  
 
  0.685
mnmE
tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
 
 0.671
mnmG
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
 
 0.665
Meso_0875
Cysteine desulfuration protein SufE; PFAM: Fe-S metabolism associated SufE; KEGG: bmb:BruAb1_0596 hypothetical protein.
     
 0.656
Meso_1136
5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
 
  
 0.598
Meso_2216
PFAM: protein of unknown function DUF1153; KEGG: mlo:msl2821 hypothetical protein.
       0.553
Meso_1584
TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease amidohydrolase 2; KEGG: sme:SMc01193 putative deoxyribonuclease.
 
     0.552
Meso_1978
PFAM: molybdopterin biosynthesis MoaE; KEGG: mlo:mlr7915 molybdopterin converting factor, subunit 2.
    
 0.546
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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