STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2249Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC cadmium-translocating P-type ATPase heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region; KEGG: mlo:mll6590 cation-transporting ATPase. (621 aa)    
Predicted Functional Partners:
Meso_3894
PFAM: Heavy metal transport/detoxification protein; KEGG: reu:Reut_A3377 heavy metal transport/detoxification protein.
  
 
 0.791
Meso_2248
UspA; PFAM: UspA; KEGG: ret:RHE_PC00109 putative universal stress UspA protein.
     
 0.528
Meso_2250
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase, subunit I; KEGG: sme:SMa0612 FixN3 cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
     
 0.528
Meso_2251
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase, mono-heme subunit/FixO; KEGG: sme:SMa0615 FixO3 cytochrome-c oxidase subunit.
     
 0.528
Meso_2253
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
     
 0.514
Meso_2252
PFAM: Cbb3-type cytochrome oxidase component; KEGG: sme:SMa0616 FixQ3 nitrogen fixation protein.
       0.498
Meso_2256
TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: sme:SMa0622 FixS2 nitrogen fixation protein.
  
  
 0.476
Meso_2255
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC copper-translocating P-type ATPase heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase Heavy metal transport/detoxification protein E1-E2 ATPase-associated region; KEGG: mlo:mll6624 nitrogen fixation protein fixI.
 
    
0.475
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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