Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Meso_2334KEGG: bja:bll0048 hypothetical protein. (172 aa)    
Predicted Functional Partners:
Meso_2333
Conjugation peptidase TraF. Serine peptidase. MEROPS family S26C; KEGG: bja:bll0047 conjugal transfer protein precursor.
 
     0.946
Meso_2332
PFAM: protein of unknown function DUF736; KEGG: bja:bll0046 hypothetical protein.
 
     0.916
Meso_2335
Plasmid segregation centromere-binding protein ParG; KEGG: bja:bsl0049 hypothetical protein.
 
     0.914
Meso_2336
Plasmid segregation oscillating ATPase ParF; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bja:bll0050 putative partition protein.
 
     0.862
Meso_2330
KEGG: nwi:Nwi_2851 conserved hypothetical/unknown protein.
 
     0.794
Meso_2338
KEGG: mlo:msr9739 hypothetical protein.
 
     0.785
Meso_0524
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: mlo:msr9739 hypothetical protein.
 
     0.780
Meso_3841
Putative transcriptional regulator; KEGG: mlo:msr9739 hypothetical protein.
 
     0.774
Meso_0519
Conjugation peptidase TraF. Serine peptidase. MEROPS family S26C; KEGG: bja:bll0047 conjugal transfer protein precursor.
 
     0.770
Meso_3838
KEGG: mlo:mlr9734 hypothetical protein.
 
     0.768
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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