Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2360Uncharacterized protein putative amidase-like protein; KEGG: pma:Pro0264 predicted amidase. (254 aa)    
Predicted Functional Partners:
Meso_2359
PFAM: aminotransferase, class IV; KEGG: bms:BRA0934 D-alanine aminotransferase, putative.
       0.773
Meso_2844
PFAM: Creatininase; KEGG: bms:BRA0986 creatinine amidohydrolase, putative.
  
     0.753
Meso_2361
KEGG: ava:Ava_1266 xenobiotic compound monooxygenase, DszA family, A subunit.
       0.570
Meso_2362
KEGG: sme:SMa1641 probable NreB protein.
       0.570
Meso_2363
KEGG: sme:SMa1641 probable NreB protein.
       0.457
Meso_0014
KEGG: bmb:BruAb1_0322 glycosyl transferase, group 2 family protein.
  
  
 0.433
Meso_0658
PFAM: glycosyl transferase, family 2; KEGG: mlo:mlr5273 glycosyltransferase, SUCCINOGLYCAN BIOSYNTHESIS PROTEIN EXOM.
  
  
 0.433
Meso_2880
PFAM: glycosyl transferase, family 2; KEGG: sme:SMb21500 putative glycosyltransferase protein.
  
  
 0.433
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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