Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2373PFAM: aminotransferase, class V; KEGG: sru:SRU_1188 aminotransferase, class V superfamily. (378 aa)    
Predicted Functional Partners:
Meso_1005
KEGG: mlo:mll0920 hypothetical protein.
  
 0.964
Meso_1780
FeS assembly ATPase SufC; KEGG: mlo:mlr0019 ABC transporter ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: ATPase.
 
  
 0.858
Meso_0875
Cysteine desulfuration protein SufE; PFAM: Fe-S metabolism associated SufE; KEGG: bmb:BruAb1_0596 hypothetical protein.
  
 0.831
Meso_1779
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD; KEGG: mlo:mlr0020 hypothetical protein.
 
 
 0.798
Meso_1781
Iron-regulated ABC transporter membrane component SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD; KEGG: bmb:BruAb1_0940 hypothetical protein.
 
 
 0.798
Meso_2374
PFAM: peptidase M24; KEGG: rpb:RPB_4421 peptidase M24.
 
    0.783
Meso_1782
PFAM: aminotransferase, class V; KEGG: mlo:mlr0015 nitrogenase cofactor synthesis protein nifS.
 
 
 0.773
Meso_4026
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rru:Rru_A0201 endonuclease/exonuclease/phosphatase.
  
 
   0.735
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.471
Meso_2375
TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: bha:BH1016 oligopeptide transport system substrate-binding protein.
       0.452
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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