Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Meso_2427TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin 4Fe-4S ferredoxin, iron-sulfur binding molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region; KEGG: bja:blr2317 formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (929 aa)    
Predicted Functional Partners:
Meso_2428
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: sil:SPO0833 formate dehydrogenase, beta subunit.
 
 0.999
Meso_2450
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: bja:bll5476 formate dehydrogenase iron-sulfur subunit.
 
 
 0.994
Meso_2451
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: bja:bll5475 putative formate dehydrogenase.
 
 
 0.993
fdhD
Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
 
 
 0.932
Meso_2449
TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region; KEGG: mag:amb2671 anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 
0.928
Meso_1027
NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 
 0.915
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
Meso_2984
PFAM: N-formylglutamate amidohydrolase; KEGG: ret:RHE_PE00071 formiminoglutamase protein.
     
  0.900
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.891
Meso_2811
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: mlo:mlr5175 indolepyruvate ferredoxin oxidoreductase.
  
 
 0.890
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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