Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2436PFAM: ABC transporter related; SMART: ATPase; KEGG: mag:amb3045 ABC-type polar amino acid transport system, ATPase component; TC 3.A.1.3.-. (240 aa)    
Predicted Functional Partners:
Meso_2437
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mag:amb3046 ABC-type tungstate transport system, periplasmic component.
  
  0.988
Meso_2435
PFAM: extracellular solute-binding protein, family 1; KEGG: bja:bll6227 putative sulfate transport system substrate-binding protein.
 
 
  0.983
Meso_2438
TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; KEGG: bja:bll2305 hypothetical protein.
 
     0.729
Meso_0040
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa2197 putative ABC transporter, permease; TC 3.A.1.3.-.
 
 0.722
Meso_1115
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.
  
 0.713
Meso_1114
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02119 probable general L-amino acid transport permease ABC transporter protein.
  
 
 0.702
Meso_3148
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV6282 putative glutamine ABC transporter permease protein; TC 3.A.1.3.-.
  
 0.675
Meso_3976
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00161 probable amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
  
 0.675
Meso_3977
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_980GM putative ABC transporter permease; TC 3.A.1.3.-.
  
 0.675
Meso_1564
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0952 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
  
 
 0.660
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.