Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2469TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II asparagine synthase; KEGG: sme:SMb20481 putative asparagine synthetase (glutamine amidotransferase) protein. (591 aa)    
Predicted Functional Partners:
Meso_2468
PFAM: GCN5-related N-acetyltransferase RimK-like ATP-grasp; KEGG: sme:SMb20482 hypothetical protein.
 
 
 0.980
Meso_2884
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II asparagine synthase; KEGG: sme:SMb20652 putative asparagine synthetase protein.
  
  
 
0.922
pyrB
TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: mlo:mlr0686 aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.917
argG
PFAM: argininosuccinate synthase; KEGG: mlo:mlr4366 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.915
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.912
Meso_2556
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
 0.907
Meso_2107
PFAM: aminotransferase, class I and II; KEGG: mlo:mlr2541 aspartate aminotransferase A.
     
 0.904
Meso_3626
PFAM: aminotransferase, class I and II; KEGG: sme:SMc04386 aspartate aminotransferase B protein.
     
 0.904
Meso_3001
TIGRFAM: aspartate kinase aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase amino acid-binding ACT; KEGG: bmb:BruAb1_1850 aspartate kinase, monofunctional class; Belongs to the aspartokinase family.
  
 
 0.867
Meso_2417
PFAM: aldehyde dehydrogenase; KEGG: mlo:mll7128 succinic semialdehyde dehydrogenase.
    
 0.809
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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