Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2516PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: vpa:VPA1118 3-hydroxyisobutyrate dehydrogenase. (292 aa)    
Predicted Functional Partners:
Meso_2839
PFAM: MOFRL; KEGG: mlo:mlr5146 hypothetical hydroxypyruvate reductase protein.
    
 0.905
Meso_3943
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: mlo:mlr5574 2-hydroxyacid dehydrogenase.
    
 0.904
Meso_4079
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: mlo:mll5489 putative 2-hydroxyacid dehydrogenase.
    
  0.900
Meso_2518
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: oih:OB3255 C4-dicarboxylate transport system permease large protein.
  
    0.726
Meso_2517
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: bbr:BB3422 putative inner membrane transport protein.
       0.718
Meso_2515
TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: sme:SMb20371 putative sugar-phosphate isomerase protein.
       0.647
Meso_2519
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: oih:OB3257 C4-dicarboxylate transport system C4-dicarboxylate-binding protein.
  
    0.574
Meso_2520
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH GntR-like; KEGG: sme:SMb20375 putative transcriptional regulator protein.
 
     0.570
Meso_1130
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mlo:mlr8392 enoyl-CoA hydratase.
 
  
 0.485
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.