Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Meso_2527PFAM: Carboxymuconolactone decarboxylase; KEGG: ret:RHE_PF00193 gamma-carboxymuconolactone decarboxylase protein. (132 aa)    
Predicted Functional Partners:
Meso_0446
TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold Ndr; KEGG: sme:SMb20579 putative beta-ketoadipate enol-lactone hydrolase protein.
  
 0.989
Meso_2526
3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_PF00194 probable 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase protein.
  
 0.972
Meso_3910
PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll4600 4-carboxymuconolactone decarboxylase, putative.
  
  
  0.972
Meso_2052
TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: mlo:mlr7211 3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.967
Meso_3622
PFAM: fumarate lyase; KEGG: bja:bll7942 probable 3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.958
Meso_2049
TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; KEGG: sme:SMb20578 putative gamma carboxymuconolactone decarboxylase protein.
  
  
 
0.911
Meso_2960
PFAM: Carboxymuconolactone decarboxylase; KEGG: bbr:BB4071 4-carboxymuconolactone decarboxylase.
  
  
 
0.911
Meso_0805
PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B1956 hypothetical protein.
    
 0.906
Meso_2525
PFAM: luciferase-like; KEGG: ret:RHE_PF00195 putative oxidoreductase protein.
 
     0.821
Meso_2528
PFAM: NIPSNAP domain containing protein; KEGG: atc:AGR_pAT_315 hypothetical protein.
       0.774
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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