Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2539PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region; KEGG: psb:Psyr_3605 trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (777 aa)    
Predicted Functional Partners:
Meso_2450
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: bja:bll5476 formate dehydrogenase iron-sulfur subunit.
  
 0.920
Meso_1036
TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase-like biotin/lipoate A/B protein ligase; KEGG: mlo:mll1351 biotin-protein ligase birA.
     
  0.900
Meso_2428
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: sil:SPO0833 formate dehydrogenase, beta subunit.
  
 
 0.830
Meso_2451
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: bja:bll5475 putative formate dehydrogenase.
  
 0.724
tuf1
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.637
Meso_1826
TIGRFAM: translation elongation factor Tu small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding elongation factor Tu-like elongation factor Tu, domain 2; KEGG: bhe:BH10530 elongation factor tu (EF-tu).
   
 
 0.637
Meso_0867
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: atc:AGR_C_1663 putative multicomponent Na+:H+ antiporter subunit D.
    
 0.585
Meso_2540
PFAM: phenylalanine/histidine ammonia-lyase; KEGG: sth:STH3194 histidine ammonia-lyase.
       0.561
Meso_2541
PFAM: ABC transporter related; SMART: ATPase; KEGG: sme:SMc00670 histidine transport ATP-binding ABC transporter protein.
       0.561
Meso_2542
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00671 histidine transport system permease ABC transporter protein.
       0.561
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.