Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Meso_2574PFAM: regulatory protein, LuxR; KEGG: ret:RHE_CH01362 probable two-component response regulator protein. (253 aa)    
Predicted Functional Partners:
Meso_1942
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ppu:PP3761 sensor histidine kinase/response regulator.
  
 
 0.886
Meso_0795
Histidine kinase; PFAM: ATP-binding region, ATPase-like; KEGG: sme:SMb21519 putative two-component sensor histidine kinase protein.
 
 
 0.812
Meso_0600
CheA signal transduction histidine kinase; PFAM: response regulator receiver CheW-like protein ATP-binding region, ATPase-like Hpt; KEGG: sme:SMa1558 putative histidine kinase, chemotaxis.
  
 
 0.636
Meso_0090
Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-4; KEGG: mlo:mll5691 two-component sensor histidine kinase.
 
 
 0.623
Meso_0797
PFAM: response regulator receiver; KEGG: ret:RHE_CH01734 probable two-component response regulator protein.
  
     0.612
Meso_0340
Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: bja:bll7016 two-component hybrid sensor and regulator.
 
 
 0.577
Meso_0757
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: bms:BR0481 sensory box/GGDEF domain/EAL domain protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL Diverse 7TM receptor, extracellular region 2 Diverse 7TM receptor, transmembrane region PAS fold-3; SMART: PAC motif.
  
 
 0.532
Meso_2575
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding regulatory protein, Crp; KEGG: rsp:RSP_3616 transcriptional regulator, Crp-Fnr family.
  
 
 0.501
Meso_3680
Multi-sensor hybrid histidine kinase; KEGG: mlo:mlr3215 two-component sensor/response regulator hybrid; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-4; SMART: PAS.
  
 
 0.490
Meso_0796
Transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR Helix-turn-helix, type 11; KEGG: ttj:TTHA1352 response regulator.
  
     0.476
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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