Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2581PFAM: condensation domain phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase. (935 aa)    
Predicted Functional Partners:
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.998
Meso_2579
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase phosphopantetheine-binding; KEGG: ava:Ava_4833 amino acid adenylation.
 
0.996
Meso_2583
PFAM: 4'-phosphopantetheinyl transferase; KEGG: gvi:glr2851 hetI protein homolog; Belongs to the P-Pant transferase superfamily.
 
 0.991
Meso_2882
PFAM: AMP-dependent synthetase and ligase; KEGG: sme:SMb20650 putative long-chain fatty-acid-CoA ligase protein.
 
 0.966
Meso_1320
PFAM: phosphopantetheine-binding; KEGG: ret:RHE_CH02478 acyl carrier protein.
  
 
 0.963
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.963
Meso_2883
KEGG: sme:SMb20651 hypothetical protein.
  
 
 0.963
Meso_0980
KEGG: mlo:mll7824 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthetase.
  
 
 0.934
Meso_3639
PFAM: AMP-dependent synthetase and ligase; KEGG: bbr:BB0583 crotonobetaine/carnitine-CoA ligase.
 
 0.930
Meso_1586
PFAM: AMP-dependent synthetase and ligase; KEGG: sme:SMa0150 malonyl-CoA synthase.
 
 
 0.917
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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