Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Meso_2587PFAM: polysaccharide biosynthesis protein; KEGG: gvi:gll1781 probable polysaccharide transport protein. (508 aa)    
Predicted Functional Partners:
Meso_2586
KEGG: ava:Ava_4835 hypothetical protein.
 
     0.822
Meso_1154
PFAM: sugar transferase; KEGG: mlo:mll8435 probable glycosyl transferase.
  
  
 0.746
Meso_2761
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.722
Meso_2762
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: mlo:mlr7552 dTDP-D-glucose-4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.718
Meso_0484
PFAM: UDP-glucose/GDP-mannose dehydrogenase NAD-dependent glycerol-3-phosphate dehydrogenase-like; KEGG: mlo:mlr5265 UDP-glucose dehydrogenase.
 
  
 0.708
Meso_2782
PFAM: UDP-glucose/GDP-mannose dehydrogenase NAD-dependent glycerol-3-phosphate dehydrogenase-like; KEGG: sme:SMc02641 UDP-glucose 6-dehydrogenase protein.
 
  
 0.708
Meso_2590
PFAM: glycosyl transferase, group 1; KEGG: ret:RHE_CH03383 probable glycosyltransferase protein.
 
  
 0.692
Meso_2589
PFAM: sugar transferase; KEGG: ret:RHE_CH03385 exopolysaccharide production protein.
  
  
 0.690
Meso_2592
PFAM: lipopolysaccharide biosynthesis; KEGG: ret:RHE_CH03233 exopolysaccharide polymerization protein.
 
  
 0.665
Meso_2691
PFAM: Nucleotidyl transferase; KEGG: ade:Adeh_0875 nucleotidyl transferase.
  
  
 0.664
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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