Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2591PFAM: glycosyl transferase, family 2; KEGG: ret:RHE_CH03387 probable glycosyltransferase protein. (306 aa)    
Predicted Functional Partners:
Meso_2592
PFAM: lipopolysaccharide biosynthesis; KEGG: ret:RHE_CH03233 exopolysaccharide polymerization protein.
 
  
 0.874
Meso_2590
PFAM: glycosyl transferase, group 1; KEGG: ret:RHE_CH03383 probable glycosyltransferase protein.
 
  
 0.849
Meso_2593
PFAM: polysaccharide export protein; KEGG: ret:RHE_CH01370 exopolysaccharide biosynthesis protein (OMA family outer membrane saccharide export protein).
 
  
 0.817
Meso_2577
KEGG: rpa:RPA3345 hypothetical protein.
 
   
 0.788
Meso_1154
PFAM: sugar transferase; KEGG: mlo:mll8435 probable glycosyl transferase.
  
  
 0.765
Meso_2594
PFAM: glycosyl transferase, group 1; KEGG: ret:RHE_CH03382 probable glycosyltransferase protein.
 
  
 0.751
Meso_0456
Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II Nucleotidyl transferase Cupin 2, conserved barrel; KEGG: bms:BRA0347 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.649
Meso_2589
PFAM: sugar transferase; KEGG: ret:RHE_CH03385 exopolysaccharide production protein.
 
  
 0.647
Meso_2586
KEGG: ava:Ava_4835 hypothetical protein.
 
     0.604
Meso_0652
PFAM: polysaccharide export protein; KEGG: mlo:mll5251 exopolysaccharide production protein exoF.
 
  
 0.584
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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