Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2610KEGG: rsp:RSP_2584 hypothetical protein. (142 aa)    
Predicted Functional Partners:
Meso_2611
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bja:blr6189 hypothetical protein.
 
    0.937
Meso_2612
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: pfl:PFL_2209 hypothetical protein; TC 3.A.1.4.-.
 
  
 0.933
Meso_2613
PFAM: ABC-2 type transporter; KEGG: sil:SPO1510 efflux ABC transporter, permease protein.
 
     0.893
Meso_2243
TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase, type 1 multicopper oxidase, type 2 multicopper oxidase, type 3; KEGG: rpa:RPA4145 dissimilatory nitrite reductase.
  
  
 0.694
Meso_3882
TIGRFAM: Twin-arginine translocation pathway signal; PFAM: multicopper oxidase, type 1 multicopper oxidase, type 2 multicopper oxidase, type 3; KEGG: lpn:lpg0265 multicopper oxidase.
  
  
 0.694
Meso_2606
SMART: Pyrrolo-quinoline quinone; KEGG: pfl:PFL_2221 quinoprotein ethanol dehydrogenase.
 
    0.689
Meso_2890
SMART: Pyrrolo-quinoline quinone; KEGG: bja:blr6207 probable quinoprotein ethanol dehydrogenase precursor.
 
    0.597
Meso_2605
PFAM: Pyrrolo-quinoline quinone; KEGG: bja:bll6220 putative alcohol dehydrogenase precursor.
 
    0.577
Meso_2893
PFAM: ABC-2 type transporter; KEGG: mta:Moth_2298 daunorubicin resistance ABC transporter membrane protein.
 
     0.557
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.