Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2622PFAM: extracellular solute-binding protein, family 5; KEGG: sil:SPO2835 dipeptide ABC transporter, periplasmic dipeptide-binding protein. (517 aa)    
Predicted Functional Partners:
Meso_1311
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr1189 permease protein of oligopeptide ABC transporter.
 
  0.761
Meso_2625
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2833 dipeptide ABC transporter, permease protein.
 
  0.744
Meso_2636
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2833 dipeptide ABC transporter, permease protein.
 
  0.744
Meso_2623
KEGG: sil:SPO2831 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; Belongs to the ABC transporter superfamily.
  
  0.727
Meso_2626
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2834 dipeptide ABC trasnporter, permease protein.
 
   0.678
Meso_2637
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3030 ABC peptide/opine transporter, inner membrane subunit.
 
   0.678
Meso_1504
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_321 dipeptide transport system permease protein DppC.
 
  0.663
Meso_2650
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0030 oligopeptide transport system permease protein.
 
  0.663
Meso_1312
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr1187 permease protein of oligopeptide ABC transporter.
 
   0.635
Meso_0076
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sil:SPO2552 peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: binding-protein-dependent transport systems inner membrane component ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase.
  
 0.626
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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