Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2640TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20 peptidase dimerisation; KEGG: ret:RHE_CH00350 probable N-carbamoyl-L-amino acid amidohydrolase protein. (422 aa)    
Predicted Functional Partners:
Meso_2664
TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase Amidohydrolase 3; KEGG: bms:BR0278 D-hydantoinase.
 
 
 0.967
Meso_2043
TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; KEGG: mlo:mll1631 N-carbamoyl-beta-alanine amidohydrolase.
  
  
 
0.920
Meso_2042
PFAM: aminotransferase class-III; KEGG: mlo:mll1632 beta-alanine-pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.907
Meso_2546
TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; KEGG: ret:RHE_CH00350 probable N-carbamoyl-L-amino acid amidohydrolase protein.
  
  
 
0.906
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.904
Meso_0313
PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_75 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
Meso_0804
PFAM: aldehyde dehydrogenase; KEGG: pfo:Pfl_3233 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
Meso_2055
Dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine dehydrogenase (NADP+); TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: sme:SMc01815 dihydropyrimidine dehydrogenase.
 
 0.884
Meso_2057
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mlo:mll1646 glutamate synthase beta subunit.
  
 
 0.830
Meso_2639
PFAM: protein of unknown function DUF917; KEGG: ret:RHE_CH00349 hypothetical protein.
 
     0.821
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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