Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2647PFAM: Hydantoinase/oxoprolinase Hydantoinaseoxoprolinase-like; KEGG: atc:AGR_pTi_62 putative N-methylhydantoinase A. (678 aa)    
Predicted Functional Partners:
Meso_2646
PFAM: Hydantoinase B/oxoprolinase; KEGG: atc:AGR_pTi_63 putative N-methylhydantoinase B.
 0.999
Meso_3732
PFAM: Hydantoinase B/oxoprolinase; KEGG: bld:BLi00396 putative N-methylhydantoinase B; RBL01742.
 0.996
Meso_3731
PFAM: Hydantoinase/oxoprolinase Hydantoinaseoxoprolinase-like; KEGG: bld:BLi00395 putative N-methylhydantoinase A; RBL01743.
  
  
 
0.915
Meso_2644
PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc03200 putative amino acid deaminase transmembrane protein.
  
    0.603
Meso_2643
PFAM: aminotransferase, class I and II Thioredoxin domain; KEGG: bcl:ABC2888 aminotransferase.
       0.598
Meso_2645
PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region; KEGG: rpa:RPA4653 biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.598
Meso_2020
PFAM: Hydantoinase/oxoprolinase Hydantoinase B/oxoprolinase Hydantoinaseoxoprolinase-like; KEGG: mlo:mlr1573 5-oxoprolinase.
 
 
0.572
Meso_0398
PFAM: Hydantoinase/oxoprolinase Hydantoinase B/oxoprolinase Hydantoinaseoxoprolinase-like; KEGG: bja:blr3621 probable hydantoin utilization protein.
 
 
0.534
Meso_2642
PFAM: Rhodanese-like; KEGG: mag:amb1299 rhodanese-related sulfurtransferase.
       0.532
Meso_2055
Dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine dehydrogenase (NADP+); TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: sme:SMc01815 dihydropyrimidine dehydrogenase.
     
  0.500
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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