STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureATIGRFAM: urease, gamma subunit; PFAM: Urease, gamma subunit region; KEGG: sme:SMc01941 urease gamma subunit protein; Belongs to the urease gamma subunit family. (100 aa)    
Predicted Functional Partners:
ureB
TIGRFAM: urease, beta subunit; PFAM: Urease, beta subunit; KEGG: jan:Jann_1747 urease, beta subunit; Belongs to the urease beta subunit family.
 0.999
ureC
Urease. Metallo peptidase. MEROPS family M38; TIGRFAM: urease, alpha subunit; PFAM: amidohydrolase Urease alpha-subunit-like; KEGG: mlo:mll4940 urease alpha subunit; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 0.999
ureF
Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.988
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.985
ureE
UreE urease accessory-like protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.984
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.978
Meso_3963
Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mlo:mll6778 arginase; Belongs to the arginase family.
    
  0.905
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
    
  0.902
Meso_2682
PFAM: HupE/UreJ protein; KEGG: atc:AGR_C_4126 hupe protein precursor.
       0.732
Meso_3354
PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mll4342 phosphinotricin acetyltransferase.
  
    0.585
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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