Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_2690KEGG: ret:RHE_CH02741 hypothetical protein. (305 aa)    
Predicted Functional Partners:
Meso_2691
PFAM: Nucleotidyl transferase; KEGG: ade:Adeh_0875 nucleotidyl transferase.
 
     0.943
Meso_2692
KEGG: ade:Adeh_0874 hypothetical protein.
 
     0.941
Meso_2689
PFAM: LmbE-like protein; KEGG: ade:Adeh_1017 LmbE-like protein.
 
     0.933
Meso_2697
PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: ret:RHE_PB00059 putative methyltransferase protein.
 
     0.900
Meso_2779
PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: ret:RHE_PB00053 probable nucleoside diphosphate epimerase protein.
 
     0.893
Meso_2693
PFAM: Phosphoglycerate mutase; KEGG: sme:SMb20250 hypothetical protein.
 
     0.871
Meso_2688
PFAM: glycosyl transferase, group 1; KEGG: ade:Adeh_1016 glycosyl transferase, group 1.
 
    0.844
Meso_2696
KEGG: ade:Adeh_1016 glycosyl transferase, group 1.
 
     0.839
Meso_2694
PFAM: GCN5-related N-acetyltransferase Myo-inositol-1-phosphate synthase Myo-inositol-1-phosphate synthase, GAPDH-like; KEGG: ret:RHE_CH02739 probable myo-inositol-1-phosphate synthase protein.
 
     0.829
Meso_2778
PFAM: glycosyl transferase, group 1; KEGG: sme:SMb20243 putative glycosyltransferase protein.
 
    0.806
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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