Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2733TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: mlo:mlr2994 2-keto-3-deoxy-6-phosphogluconate aldolase. (213 aa)    
Predicted Functional Partners:
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
 
 0.990
glk
TIGRFAM: glucokinase; PFAM: Glucokinase; KEGG: mlo:mlr4640 glucokinase (glk); Belongs to the bacterial glucokinase family.
 
 
 0.935
Meso_0311
TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: sme:SMc00768 isocitrate lyase.
     
 0.909
Meso_0363
PFAM: FAD linked oxidase-like; KEGG: mlo:mlr6919 glycolate oxidase subunits GlcE.
   
 
 0.907
Meso_0364
PFAM: FAD linked oxidase-like; KEGG: mlo:mlr6916 glycolate oxidase subunit GlcD.
   
 
 0.907
Meso_3310
PFAM: alanine racemase-like; KEGG: jan:Jann_2604 alanine racemase-like.
    
  0.906
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
     
 0.904
Meso_0361
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding protein of unknown function DUF224, cysteine-rich region; KEGG: mlo:mlr6920 glycolate oxidase subunit, (Fe-S)protein.
     
 0.902
Meso_3943
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: mlo:mlr5574 2-hydroxyacid dehydrogenase.
    
  0.902
Meso_4079
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: mlo:mll5489 putative 2-hydroxyacid dehydrogenase.
    
  0.902
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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