Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2736PFAM: protein of unknown function DUF107; KEGG: mlo:mlr3022 hypothetical protein. (153 aa)    
Predicted Functional Partners:
Meso_2735
PFAM: band 7 protein; KEGG: mlo:mlr3021 hypothetical protein.
 
 
 0.972
Meso_0225
KEGG: mlo:mll0462 hypothetical protein.
  
  
 0.727
Meso_3368
PFAM: band 7 protein; KEGG: ret:RHE_PC00075 probable stomatin-like protein.
  
 
 0.598
Meso_3369
PFAM: protein of unknown function DUF107; KEGG: sme:SMb20990 probable membrane protein necessary for nodulation competitiveness.
  
  
 0.570
Meso_3245
PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: bms:BR1903 succinate dehydrogenase, hydrophobic membrane anchor protein, putative.
  
     0.544
Meso_1748
Protease FtsH subunit HflC; HflC and HflK could regulate a protease.
 
 
 0.480
Meso_1749
Protease FtsH subunit HflK; HflC and HflK could encode or regulate a protease.
 
 
 0.467
Meso_1386
PFAM: phosphatidate cytidylyltransferase; KEGG: mlo:mll0639 phosphatidate cytidylyltransferase; Belongs to the CDS family.
   
    0.449
Meso_1969
PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region; KEGG: bmb:BruAb1_0726 oxidoreductase, molybdopterin-binding, hypothetical; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.401
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.