Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2775KEGG: rsp:RSP_0515 hypothetical protein. (363 aa)    
Predicted Functional Partners:
Meso_2778
PFAM: glycosyl transferase, group 1; KEGG: sme:SMb20243 putative glycosyltransferase protein.
 
    0.957
Meso_2779
PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: ret:RHE_PB00053 probable nucleoside diphosphate epimerase protein.
 
    0.954
Meso_2780
PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: ret:RHE_PB00052 probable NDP-glucose dehydratase epimerase protein.
 
    0.948
Meso_2781
KEGG: rsp:RSP_1504 hypothetical protein.
 
     0.887
Meso_2777
KEGG: ret:RHE_PB00055 hypothetical protein.
 
    
0.862
Meso_2776
KEGG: ret:RHE_PB00056 hypothetical protein.
 
    
0.843
Meso_2784
PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: ret:RHE_PB00051 putative oxidoreductase protein.
 
     0.809
Meso_2697
PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: ret:RHE_PB00059 putative methyltransferase protein.
 
     0.805
Meso_2785
PFAM: oxidoreductase-like Oxidoreductase-like; KEGG: ret:RHE_PB00050 putative oxidoreductase protein.
 
     0.801
Meso_2690
KEGG: ret:RHE_CH02741 hypothetical protein.
 
     0.796
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.