Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2797PFAM: MaoC-like dehydratase; KEGG: mlo:mlr3097 nodulation protein NodN-Rhizobium leguminosarum. (163 aa)    
Predicted Functional Partners:
Meso_3287
PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: rso:RSc1203 NADPH quinone oxidoreductase, putative.
 0.828
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.794
Meso_2798
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr3100 oxidoreductase, short chain dehydrogenase/reductase.
  
 0.677
Meso_2947
PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: pae:PA5234 quinone oxidoreductase.
 0.677
Meso_3278
PFAM: acyl-CoA dehydrogenase-like; KEGG: rpb:RPB_0558 acyl-CoA dehydrogenase-like.
 
 0.640
Meso_0021
PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding NAD-dependent glycerol-3-phosphate dehydrogenase-like; KEGG: mlo:mlr5629 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
 
 0.615
Meso_3751
PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 6-phosphogluconate dehydrogenase, NAD-binding 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: bpm:BURPS1710b_0633 enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase.
 
 0.602
Meso_1769
[Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase region; KEGG: mlo:mlr7849 malonyl CoA-acyl carrier protein transacylase.
     
 0.600
Meso_1360
PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mlo:mll0685 probable acyl-CoA dehydrogenase.
 
 0.551
Meso_3279
PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: reu:Reut_C6297 acyl-CoA dehydrogenase, C-terminal.
 
 0.540
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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