Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2798PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr3100 oxidoreductase, short chain dehydrogenase/reductase. (277 aa)    
Predicted Functional Partners:
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.910
Meso_2950
PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_4004 short-chain dehydrogenase/reductase SDR.
  
     0.772
Meso_2581
PFAM: condensation domain phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase.
  
 0.760
Meso_0822
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pae:PA3507 short chain dehydrogenase.
  
     0.699
Meso_1974
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr7910 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.696
Meso_2797
PFAM: MaoC-like dehydratase; KEGG: mlo:mlr3097 nodulation protein NodN-Rhizobium leguminosarum.
  
 0.677
Meso_1537
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr0808 3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.637
Meso_3682
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_PB00044 putative short chain oxidoreductase protein.
  
 
  0.562
Meso_3522
PFAM: short-chain dehydrogenase/reductase SDR SEC-C motif; KEGG: sme:SMc01204 putative transmembrane oxidoreductase protein oxidoreductase.
 
 
 
0.485
Meso_3769
PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: ade:Adeh_3217 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
0.466
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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