Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2823PFAM: coenzyme A transferase; KEGG: mlo:mll4183 acetate CoA-transferase, alpha subunit. (285 aa)    
Predicted Functional Partners:
Meso_2824
PFAM: coenzyme A transferase; KEGG: mlo:mll4181 acetoacetyl-CoA transferase b subunit.
 0.999
Meso_2970
PFAM: coenzyme A transferase; KEGG: nph:NP6032A 3-oxoacid CoA-transferase, beta subunit.
 
 0.997
Meso_2969
KEGG: gme:Gmet_2205 coenzyme A transferase.
  
  
 
0.929
Meso_2296
PFAM: Amidase; KEGG: dar:Daro_1360 amidase; Belongs to the amidase family.
     
  0.900
Meso_2714
PFAM: Amidase; KEGG: mlo:mlr2975 glutamyl-tRNA(Gln) amidotransferase, subunitA.
     
  0.900
Meso_2825
3-oxoadipyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: mlo:mll4180 beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.802
Meso_2822
Transcriptional regulator, IclR family; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory proteins, IclR; KEGG: mlo:mlr4184 transcriptional regulator PcaR.
 
  
 0.654
Meso_0918
3-methylcrotonoyl-CoA carboxylase, alpha subunit; PFAM: biotin/lipoyl attachment ATP-dependent carboxylate-amine ligase-like, ATP-grasp Carbamoyl-phosphate synthase L chain, ATP-binding Carbamoyl-phosphate synthetase large chain-like biotin carboxylase-like RimK-like ATP-grasp; KEGG: mlo:mll7727 3-methylcrotonyl-CoA carboxylase biotin-containing subunit.
  
  
 0.476
Meso_1020
Biotin carboxyl carrier protein / biotin carboxylase; PFAM: biotin/lipoyl attachment Carbamoyl-phosphate synthase L chain, ATP-binding Carbamoyl-phosphate synthetase large chain-like biotin carboxylase-like RimK-like ATP-grasp; KEGG: mlo:mll0871 propionyl-CoA carboxylase alpha chain precursor.
  
  
 0.476
Meso_2051
TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bmb:BruAb2_0580 protocatechuate 3,4-dioxygenase, alpha subunit.
 
  
 0.405
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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