Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Meso_2832PFAM: Transthyretin; KEGG: mlo:mlr5133 hypothetical protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (121 aa)    
Predicted Functional Partners:
Meso_2831
PFAM: polysaccharide deacetylase; KEGG: mlo:mll5132 hypothetical protein.
  
 0.954
Meso_2834
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mlo:mlr5135 xanthine dehydrogenase, xdhB.
 
  
 0.913
Meso_2833
PFAM: ferredoxin molybdopterin dehydrogenase, FAD-binding [2Fe-2S]-binding CO dehydrogenase flavoprotein-like; KEGG: mlo:mlr5134 xanthine dehydrogenase, xdhA.
 
     0.898
Meso_2835
Molybdenum cofactor sulfurylase; PFAM: protein of unknown function DUF182; KEGG: mlo:mlr5136 xanthine dehydrogenase accessory factor.
 
     0.840
Meso_2837
PFAM: protein of unknown function DUF989; KEGG: mlo:mlr5140 hypothetical protein.
 
  
 0.835
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
    0.814
Meso_2838
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
  
 0.781
Meso_2830
PFAM: protein of unknown function DUF861, cupin_3 Cupin 2, conserved barrel; KEGG: mlo:mll5131 hypothetical protein.
 
   
 0.702
Meso_0799
PFAM: polysaccharide deacetylase; KEGG: son:SO4151 polysaccharide deacetylase family protein.
 
    0.626
Meso_2828
PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mlo:mll5129 hypothetical protein.
       0.550
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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