Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2856PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2872 ABC alpha-glucoside transporter, inner membrane subunit AglF. (346 aa)    
Predicted Functional Partners:
Meso_2857
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03063 alpha-glucosides transport system permease ABC transporter protein.
 
 0.996
Meso_2855
Trehalose-binding protein / sucrose-binding protein / maltose-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: ret:RHE_CH00696 alpha-glucoside ABC transporter, substrate-binding protein.
 
 0.989
Meso_2858
Alpha-glucoside transport system ATP-binding protein; PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: sme:SMc03065 alpha-glucosides transport ATP-binding ABC transporter protein.
 
 0.987
Meso_1098
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: ret:RHE_PF00090 probable sugar ABC transporter, ATP-binding protein; TC 3.A.1.1.-.
 
 0.954
Meso_3768
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: ret:RHE_PF00090 probable sugar ABC transporter, ATP-binding protein; TC 3.A.1.1.-.
 
 0.953
Meso_2302
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: tma:TM1276 putative multiple sugar transport system ATP-binding protein; TC 3.A.1.1.-.
 
 0.943
Meso_3557
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1444 ABC sugar transporter, inner membrane subunit; TC 3.A.1.1.-.
 
 0.850
Meso_1096
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3682 multiple sugar transport system permease protein; TC 3.A.1.1.-.
 
 0.843
Meso_2303
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hma:rrnAC3195 sugar ABC transporter permease protein; TC 3.A.1.1.-.
 
 0.840
Meso_3773
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0851 putative multiple sugar transport system permease protein; TC 3.A.1.1.-.
 
 0.833
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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