Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2877PFAM: glycosyl transferase, group 1; KEGG: sme:SMb21503 putative glycosyltransferase protein. (426 aa)    
Predicted Functional Partners:
Meso_2878
PFAM: glycosyl transferase, group 1; KEGG: sme:SMb21502 putative glycosyltransferase protein.
 
     0.860
Meso_2875
PFAM: O-antigen polymerase; KEGG: sme:SMb21505 putative membrane protein, similar to Wzy-like polysaccharide polymerase ExoQ.
  
  
 0.794
Meso_2876
PFAM: polysaccharide deacetylase; KEGG: sme:SMb21504 putative protein, slightly similar to carbohydrate deacetylase.
  
  
 0.782
Meso_2874
PFAM: lipopolysaccharide biosynthesis; KEGG: sme:SMb21506 putative auxiliar protein involved in export of cell surface polysaccharides, MPA1 family without cytosolic domain, slightly ExoP-like.
  
  
 0.752
Meso_2880
PFAM: glycosyl transferase, family 2; KEGG: sme:SMb21500 putative glycosyltransferase protein.
 
   
 0.672
Meso_1154
PFAM: sugar transferase; KEGG: mlo:mll8435 probable glycosyl transferase.
 
  
 0.605
Meso_2872
KEGG: sme:SMb21513 putative cell-surface polysaccharide exporter protein, PST family.
  
  
 0.533
Meso_2127
PFAM: glycosyl transferase, family 8; KEGG: ret:RHE_CH03469 glycosyltransferase (sulfolipid biosynthesis) protein.
   
 0.483
Meso_2782
PFAM: UDP-glucose/GDP-mannose dehydrogenase NAD-dependent glycerol-3-phosphate dehydrogenase-like; KEGG: sme:SMc02641 UDP-glucose 6-dehydrogenase protein.
 
  
 0.480
Meso_0484
PFAM: UDP-glucose/GDP-mannose dehydrogenase NAD-dependent glycerol-3-phosphate dehydrogenase-like; KEGG: mlo:mlr5265 UDP-glucose dehydrogenase.
 
  
 0.470
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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