Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_2878PFAM: glycosyl transferase, group 1; KEGG: sme:SMb21502 putative glycosyltransferase protein. (367 aa)    
Predicted Functional Partners:
Meso_2877
PFAM: glycosyl transferase, group 1; KEGG: sme:SMb21503 putative glycosyltransferase protein.
 
     0.860
Meso_2880
PFAM: glycosyl transferase, family 2; KEGG: sme:SMb21500 putative glycosyltransferase protein.
 
   
 0.852
Meso_2879
KEGG: rpb:RPB_1005 hypothetical protein.
       0.762
Meso_1154
PFAM: sugar transferase; KEGG: mlo:mll8435 probable glycosyl transferase.
 
  
 0.648
Meso_2590
PFAM: glycosyl transferase, group 1; KEGG: ret:RHE_CH03383 probable glycosyltransferase protein.
  
     0.601
Meso_2875
PFAM: O-antigen polymerase; KEGG: sme:SMb21505 putative membrane protein, similar to Wzy-like polysaccharide polymerase ExoQ.
 
  
 0.580
Meso_2874
PFAM: lipopolysaccharide biosynthesis; KEGG: sme:SMb21506 putative auxiliar protein involved in export of cell surface polysaccharides, MPA1 family without cytosolic domain, slightly ExoP-like.
 
  
 0.561
Meso_2127
PFAM: glycosyl transferase, family 8; KEGG: ret:RHE_CH03469 glycosyltransferase (sulfolipid biosynthesis) protein.
   
 0.483
Meso_0649
PFAM: polysaccharide biosynthesis protein; KEGG: ret:RHE_PE00198 putative succinoglycan biosynthesis transport protein.
 
  
 0.473
Meso_2876
PFAM: polysaccharide deacetylase; KEGG: sme:SMb21504 putative protein, slightly similar to carbohydrate deacetylase.
  
  
 0.469
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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