Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_2880PFAM: glycosyl transferase, family 2; KEGG: sme:SMb21500 putative glycosyltransferase protein. (331 aa)    
Predicted Functional Partners:
Meso_2878
PFAM: glycosyl transferase, group 1; KEGG: sme:SMb21502 putative glycosyltransferase protein.
 
   
 0.852
Meso_2879
KEGG: rpb:RPB_1005 hypothetical protein.
       0.774
Meso_0712
Tetratricopeptide TPR_2; PFAM: TPR repeat Peptidoglycan-binding LysM Tetratricopeptide TPR_4 Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: mlo:mlr7432 hypothetical protein.
  
 
 0.683
Meso_2801
PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: ret:RHE_CH03608 probable O-linked GlcNAc transferase protein.
  
 
 0.681
Meso_3257
PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: mlo:mlr3815 hypothetical protein.
  
 
 0.681
Meso_2877
PFAM: glycosyl transferase, group 1; KEGG: sme:SMb21503 putative glycosyltransferase protein.
 
   
 0.672
Meso_1942
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ppu:PP3761 sensor histidine kinase/response regulator.
 
 
 0.660
Meso_0757
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: bms:BR0481 sensory box/GGDEF domain/EAL domain protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL Diverse 7TM receptor, extracellular region 2 Diverse 7TM receptor, transmembrane region PAS fold-3; SMART: PAC motif.
  
  
 0.642
Meso_2876
PFAM: polysaccharide deacetylase; KEGG: sme:SMb21504 putative protein, slightly similar to carbohydrate deacetylase.
  
  
 0.487
Meso_0522
Plasmid segregation oscillating ATPase ParF; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bja:bll0050 putative partition protein.
  
 
 0.481
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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