STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_2889Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (274 aa)    
Predicted Functional Partners:
Meso_2890
SMART: Pyrrolo-quinoline quinone; KEGG: bja:blr6207 probable quinoprotein ethanol dehydrogenase precursor.
  
  
 0.619
Meso_1563
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
  
 0.580
Meso_2894
Daunorubicin resistance ABC transporter ATPase subunit; KEGG: pab:PAB1923 daunorubicin resistance transport system ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: ATPase.
    
 0.574
Meso_2893
PFAM: ABC-2 type transporter; KEGG: mta:Moth_2298 daunorubicin resistance ABC transporter membrane protein.
    
  0.573
Meso_1114
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02119 probable general L-amino acid transport permease ABC transporter protein.
  
 
 0.559
Meso_1564
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0952 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
  
 
 0.531
Meso_2891
PFAM: cytochrome c, class I.
  
  
 0.526
Meso_3121
KEGG: aci:ACIAD1212 putative phosphate transporter (ABC superfamily, peri-bind); TC 3.A.1.7.1.
  
 
 0.519
Meso_2975
KEGG: ava:Ava_5014 ABC-type phosphate/phosphonate transport system periplasmic component-like.
     
 0.497
Meso_0599
PFAM: histidine kinase, HAMP region chemotaxis sensory transducer; KEGG: sme:SMa1556 putative methyl-accepting chemotaxis protein.
     
 0.494
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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