Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_2934PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_C7651 glyoxalase/bleomycin resistance protein/dioxygenase. (295 aa)    
Predicted Functional Partners:
Meso_2504
TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase; KEGG: jan:Jann_3499 2-oxo-hepta-3-ene-1,7-dioic acid hydratase.
 
   
 0.787
Meso_1076
PFAM: Hydratase/decarboxylase; KEGG: reu:Reut_B5691 4-oxalocrotonate decarboxylase.
 
   
 0.785
Meso_2933
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH GntR-like; KEGG: dar:Daro_3790 regulatory protein GntR, HTH:GntR, C-terminal.
 
     0.760
Meso_2508
PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bms:BRA1162 5-carboxymethyl-2-hydroxymuconate delta isomerase.
  
     0.689
Meso_2465
PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: pae:PA4091 4-hydroxyphenylacetate 3-monooxygenase large chain.
 
     0.597
Meso_2935
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: jan:Jann_2035 TRAP-type C4-dicarboxylate transport system periplasmic component-like.
       0.536
Meso_2936
KEGG: jan:Jann_2036 hypothetical protein.
       0.533
Meso_2937
PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: jan:Jann_2037 TRAP dicarboxylate transporter-DctM subunit.
       0.533
Meso_3284
PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: jan:Jann_3769 monooxygenase, FAD-binding.
 
   
 0.522
nadX
Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
    0.489
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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