Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Score
Meso_2943Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: pfo:Pfl_3279 transcriptional regulator, LysR family. (297 aa)    
Predicted Functional Partners:
Meso_0578
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: gvi:glr2986 LysR family transcriptional regulatory protein.
  
     0.723
Meso_3318
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: mlo:mlr3988 transcriptional regulator.
  
     0.644
Meso_2549
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: reu:Reut_C5891 regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.609
Meso_2942
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pae:PA1379 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.595
Meso_0465
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: mlo:mll6938 transcriptional regulator.
  
     0.594
Meso_2462
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: bja:bll2775 transcriptional regulatory protein.
  
     0.586
Meso_2941
PFAM: aldo/keto reductase; KEGG: ret:RHE_CH00449 probable oxidoreductase protein.
       0.419
Meso_2944
PFAM: ThiJ/PfpI; KEGG: bbr:BB2338 probable transcriptional regulator.
  
    0.418
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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