Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Meso_2976Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH UbiC transcription regulator-associated; KEGG: ret:RHE_PE00075 probable transcriptional regulator protein, GntR family. (242 aa)    
Predicted Functional Partners:
hutI
TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase Amidohydrolase 3; KEGG: ret:RHE_PE00073 imidazolonepropionase protein; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
  
 0.737
Meso_2982
PFAM: protein of unknown function DUF886; KEGG: ret:RHE_PE00069 hypothetical protein.
 
  
 0.734
Meso_3625
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH UbiC transcription regulator-associated; KEGG: ppu:PP2066 transcriptional regulator, GntR family.
  
     0.711
Meso_2987
TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase; KEGG: ret:RHE_PE00074 probable cytosine deaminase protein.
 
  
 0.678
Meso_2984
PFAM: N-formylglutamate amidohydrolase; KEGG: ret:RHE_PE00071 formiminoglutamase protein.
 
  
 0.631
Meso_2978
PFAM: phenylalanine/histidine ammonia-lyase; KEGG: mlo:mll7124 histidine ammonia-lyase.
 
  
 0.577
hutU-2
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.570
Meso_2977
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cya:CYA_2230 quaternary amine uptake ABC transporter (QAT) family, substrate-binding protein.
       0.536
Meso_2863
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: bmb:BruAb2_0322 NagA, N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.531
Meso_2466
PFAM: helix-turn-helix, AraC type; KEGG: pae:PA0248 probable transcriptional regulator.
  
  
 0.530
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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