Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3005Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. (93 aa)    
Predicted Functional Partners:
Meso_2703
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.971
Meso_1332
Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
 0.926
secB
Protein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
 
  
 0.885
Meso_3004
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mlo:mll3450 similar to nitrilase, nitrilase 1 like protein.
 
 
 
 0.866
Meso_3003
PFAM: protein of unknown function DUF1178; KEGG: bms:BR1874 hypothetical protein.
       0.838
Meso_1273
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mlo:mll0053 monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.832
Meso_3006
PFAM: phosphoribosyltransferase; KEGG: mlo:mll3453 hypothetical protein.
       0.741
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.725
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.725
Meso_1276
Transcriptional regulator, BolA protein family; PFAM: BolA-like protein; KEGG: mlo:msl0055 hypothetical protein; Belongs to the BolA/IbaG family.
 
 0.700
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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