Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Meso_3007PFAM: Methyltransferase type 11; KEGG: mlo:mlr3455 hypothetical protein. (292 aa)    
Predicted Functional Partners:
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.920
Meso_2581
PFAM: condensation domain phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase.
    
 0.819
Meso_1099
PFAM: ETC complex I subunit conserved region; KEGG: sme:SMc00287 putative oxidoreductase protein.
  
     0.749
Meso_2151
PFAM: protein of unknown function DUF185; KEGG: mlo:mlr2680 hypothetical protein.
  
     0.743
Meso_1028
NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
   
 0.691
Meso_1719
PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: bms:BR0902 NADH-ubiquinone oxidoreductase.
  
     0.640
Meso_3006
PFAM: phosphoribosyltransferase; KEGG: mlo:mll3453 hypothetical protein.
       0.605
Meso_1794
PFAM: Squalene/phytoene synthase; KEGG: mlo:mll1068 phytoene synthase.
 
   
 0.595
Meso_2922
PFAM: cytochrome c, class I; KEGG: pfo:Pfl_3552 cytochrome c, class I.
  
    0.581
Meso_3005
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
  
  
 0.581
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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