Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Meso_3009KEGG: mlo:mll3458 hypothetical protein. (119 aa)    
Predicted Functional Partners:
Meso_3008
Hypothetical protein.
       0.773
Meso_3011
PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mll3460 hypothetical protein.
       0.681
argJ
N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
       0.666
Meso_3010
TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: atc:AGR_L_2627 probable pyrophosphohydrolase.
       0.658
Meso_3013
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mlo:mll3467 similar to cell binding factor 2 precursor.
       0.464
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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