Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3031TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mlo:mlr3485 hypothetical protein; Belongs to the Cob(I)alamin adenosyltransferase family. (192 aa)    
Predicted Functional Partners:
Meso_3071
Cobaltochelatase CobT subunit; KEGG: mlo:mll3561 CobT protein; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase, CobT subunit; SMART: von Willebrand factor, type A.
    
  0.901
Meso_1289
PFAM: flavin reductase-like, FMN-binding; KEGG: mlo:mlr0087 putative 4-hydroxyphenylacetate 3-monooxygenase.
     
  0.900
Meso_3069
TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities, AAA_5; KEGG: bme:BMEI0049 CobS protein.
     
  0.900
Meso_3030
KEGG: ret:RHE_CH03789 hypothetical protein.
  
    0.781
Meso_3032
PFAM: Rhomboid-like protein; KEGG: atc:AGR_L_2465 hypothetical protein.
       0.750
Meso_3029
PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr3482 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.698
Meso_0856
TIGRFAM: methylmalonyl-CoA mutase, large subunit Methylmalonyl-CoA mutase-like; PFAM: methylmalonyl-CoA mutase cobalamin B12-binding; KEGG: mlo:mll7619 methylmalonyl-CoA large subunit.
 
   
 0.649
Meso_0328
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.635
Meso_3989
uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
     
 0.569
Meso_3028
TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: mlo:mll3481 contains similarity to transporter (YfkH).
       0.540
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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