Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3129PFAM: aldo/keto reductase; KEGG: dar:Daro_2761 aldo/keto reductase. (325 aa)    
Predicted Functional Partners:
Meso_4023
PFAM: aldo/keto reductase; KEGG: ade:Adeh_2028 2,5-didehydrogluconate reductase.
 
 
 0.562
Meso_3052
PFAM: aldo/keto reductase; KEGG: sme:SMc00101 putative oxidoreductase protein.
 
 
0.485
Meso_3130
PFAM: regulatory protein GntR, HTH; KEGG: sth:STH2673 GntR family transcriptional regulator.
       0.478
Meso_3131
PFAM: extracellular solute-binding protein, family 5; KEGG: gsu:GSU1433 peptide ABC transporter, periplasmic peptide-binding protein.
       0.478
Meso_3134
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: hma:pNG7365 serine protease.
 
     0.459
Meso_3900
PFAM: aldo/keto reductase; KEGG: ade:Adeh_3218 aldo/keto reductase.
  
 
 0.417
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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