Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_3188PFAM: OmpA/MotB; KEGG: mlo:mlr3926 similar to flagellar motor protein MotB. (343 aa)    
Predicted Functional Partners:
Meso_0303
KEGG: mlo:mll2905 flagellar motor protein MotA.
  
 0.989
Meso_3187
KEGG: mlo:mlr3925 hypothetical protein.
 
     0.961
Meso_0600
CheA signal transduction histidine kinase; PFAM: response regulator receiver CheW-like protein ATP-binding region, ATPase-like Hpt; KEGG: sme:SMa1558 putative histidine kinase, chemotaxis.
 
  
 0.942
Meso_0598
PFAM: CheW-like protein; KEGG: sme:SMa1554 putative purine-binding chemotaxis protein CheW.
 
  
 0.850
Meso_0297
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078-like; KEGG: mlo:mlr2912 flagellar basal-body rod protein flgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.841
Meso_2069
PFAM: OmpA/MotB; KEGG: mlo:mlr2412 hypothetical protein.
   
 0.828
Meso_0284
PFAM: OmpA/MotB; KEGG: mlo:mlr2931 flagellar motor protein MotB.
     
 0.804
Meso_0278
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078-like; KEGG: mlo:mlr2938 flagellar hook-associated protein 1 FlgK.
  
  
 0.778
pal
OmpA/MotB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.773
Meso_0601
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
  
 0.760
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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