Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Meso_3189KEGG: mlo:mll3934 ABC transporter, ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase. (601 aa)    
Predicted Functional Partners:
Meso_3975
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: atc:AGR_L_381 glutamine ABC transporter, ATP-binding protein (glnQ); TC 3.A.1.3.-.
 
   
 
0.796
Meso_0063
PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: sme:SMc00790 probable dipeptide transport ATP-binding ABC transporter protein; Belongs to the ABC transporter superfamily.
   
 
0.689
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.682
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.640
Meso_1937
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll6253 ABC transporter permease protein.
   
 
  0.635
Meso_0975
PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: bms:BR0442 ABC transporter, ATP-binding/permease protein.
  
 
0.598
Meso_3147
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV6281 putative ABC transporter ATP-binding protein - glutamine transport; TC 3.A.1.3.-.
 
   
 
0.576
Meso_1754
PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mlr7932 ABC transporter, ATP-binding component.
 
 0.553
rpmE
LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
       0.530
Meso_1540
Protein of unknown function DUF140; PFAM: Sulfate transporter/antisigma-factor antagonist STAS protein of unknown function DUF140; KEGG: mlo:mll0801 putative ABC transport system permease protein.
 
 
 0.490
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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