Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_3236TIGRFAM: ammonium transporter; PFAM: Rh-like protein/ammonium transporter; KEGG: atc:AGR_C_5001 probable ammonium transporter protein; TC 1.A.11. (454 aa)    
Predicted Functional Partners:
Meso_3237
PFAM: nitrogen regulatory protein P-II; KEGG: atc:AGR_C_4999 probable nitrogen regulatory protein; Belongs to the P(II) protein family.
 
 0.999
Meso_1545
PFAM: nitrogen regulatory protein P-II; KEGG: ret:RHE_CH02103 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.996
Meso_2744
PFAM: glutamine amidotransferase, class-II glutamate synthase, alpha subunit-like ferredoxin-dependent glutamate synthase glutamate synthase; KEGG: mlo:mll3030 glutamate synthase (NADPH) large chain.
 
  
 0.769
Meso_1619
Signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase-like histidine kinase A-like PAS fold; SMART: PAS; KEGG: mlo:mlr0397 nitrogen reguration protein nirB protein.
  
 
 0.762
Meso_0351
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region; KEGG: atc:AGR_C_680 hypothetical protein.
  
 
 0.621
Meso_0090
Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-4; KEGG: mlo:mll5691 two-component sensor histidine kinase.
  
 
 0.512
Meso_1448
PFAM: response regulator receiver ANTAR; KEGG: mlo:mlr2855 two-component response regulator.
  
  
 0.509
Meso_3235
DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase; KEGG: mlo:mll4243 cell division protein ftsK homolog.
     
 0.503
Meso_3357
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
  
 0.498
Meso_3238
TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; KEGG: bms:BR1898 acyl-CoA thioesterase II.
       0.493
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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